J6_4WQU_003

3D structure

PDB id

4WQU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

4WQU|1|CA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQU|1|CA|G|44
4WQU|1|CA|C|45
*
4WQU|1|CA|G|179
4WQU|1|CA|G|180
4WQU|1|CA|A|181
4WQU|1|CA|A|182
4WQU|1|CA|C|183
*
4WQU|1|CA|G|214
4WQU|1|CA|G|215
4WQU|1|CA|A|216
4WQU|1|CA|G|217
4WQU|1|CA|A|218
4WQU|1|CA|G|219
4WQU|1|CA|G|220
4WQU|1|CA|A|221
4WQU|1|CA|A|222
4WQU|1|CA|A|223
4WQU|1|CA|G|224
*
4WQU|1|CA|C|231
4WQU|1|CA|G|232
4WQU|1|CA|A|233
4WQU|1|CA|C|234
4WQU|1|CA|U|235
*
4WQU|1|CA|A|262
4WQU|1|CA|C|263
4WQU|1|CA|C|264
4WQU|1|CA|A|265
4WQU|1|CA|G|266
*
4WQU|1|CA|C|426
4WQU|1|CA|U|427
4WQU|1|CA|A|428
4WQU|1|CA|A|429
4WQU|1|CA|G|430
4WQU|1|CA|U|431
4WQU|1|CA|A|432
4WQU|1|CA|C|433

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain C7

50S ribosomal protein L34