J6_4WRA_001

3D structure

PDB id

4WRA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.05 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

4WRA|1|14|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WRA|1|14|G|45
4WRA|1|14|C|46
*
4WRA|1|14|G|179
4WRA|1|14|G|180
4WRA|1|14|A|181
4WRA|1|14|A|182
4WRA|1|14|C|183
*
4WRA|1|14|G|214
4WRA|1|14|G|215
4WRA|1|14|A|216
4WRA|1|14|G|217
4WRA|1|14|A|218
4WRA|1|14|G|219
4WRA|1|14|G|220
4WRA|1|14|A|221
4WRA|1|14|A|222
4WRA|1|14|A|223
4WRA|1|14|G|224
*
4WRA|1|14|C|231
4WRA|1|14|G|232
4WRA|1|14|A|233
4WRA|1|14|C|234
4WRA|1|14|U|235
*
4WRA|1|14|A|262
4WRA|1|14|C|263
4WRA|1|14|C|264
4WRA|1|14|A|265
4WRA|1|14|G|266
*
4WRA|1|14|C|426
4WRA|1|14|U|427
4WRA|1|14|A|428
4WRA|1|14|A|429
4WRA|1|14|G|430
4WRA|1|14|U|431
4WRA|1|14|A|432
4WRA|1|14|C|433

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain L5

50S ribosomal protein L34