J6_4WT1_001

3D structure

PDB id

4WT1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.05 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

4WT1|1|14|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WT1|1|14|G|45
4WT1|1|14|C|46
*
4WT1|1|14|G|179
4WT1|1|14|G|180
4WT1|1|14|A|181
4WT1|1|14|A|182
4WT1|1|14|C|183
*
4WT1|1|14|G|214
4WT1|1|14|G|215
4WT1|1|14|A|216
4WT1|1|14|G|217
4WT1|1|14|A|218
4WT1|1|14|G|219
4WT1|1|14|G|220
4WT1|1|14|A|221
4WT1|1|14|A|222
4WT1|1|14|A|223
4WT1|1|14|G|224
*
4WT1|1|14|C|231
4WT1|1|14|G|232
4WT1|1|14|A|233
4WT1|1|14|C|234
4WT1|1|14|U|235
*
4WT1|1|14|A|262
4WT1|1|14|C|263
4WT1|1|14|C|264
4WT1|1|14|A|265
4WT1|1|14|G|266
*
4WT1|1|14|C|426
4WT1|1|14|U|427
4WT1|1|14|A|428
4WT1|1|14|A|429
4WT1|1|14|G|430
4WT1|1|14|U|431
4WT1|1|14|A|432
4WT1|1|14|C|433

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain L5

50S ribosomal protein L34