J6_4WU1_003

3D structure

PDB id

4WU1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Tyr and mRNA with G-U mismatch in the second position in the P-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

4WU1|1|1H|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WU1|1|1H|G|45
4WU1|1|1H|C|46
*
4WU1|1|1H|G|179
4WU1|1|1H|G|180
4WU1|1|1H|A|181
4WU1|1|1H|A|182
4WU1|1|1H|C|183
*
4WU1|1|1H|G|214
4WU1|1|1H|G|215
4WU1|1|1H|A|216
4WU1|1|1H|G|217
4WU1|1|1H|A|218
4WU1|1|1H|G|219
4WU1|1|1H|G|220
4WU1|1|1H|A|221
4WU1|1|1H|A|222
4WU1|1|1H|A|223
4WU1|1|1H|G|224
*
4WU1|1|1H|C|231
4WU1|1|1H|G|232
4WU1|1|1H|A|233
4WU1|1|1H|C|234
4WU1|1|1H|U|235
*
4WU1|1|1H|A|262
4WU1|1|1H|C|263
4WU1|1|1H|C|264
4WU1|1|1H|A|265
4WU1|1|1H|G|266
*
4WU1|1|1H|C|426
4WU1|1|1H|U|427
4WU1|1|1H|A|428
4WU1|1|1H|A|429
4WU1|1|1H|G|430
4WU1|1|1H|U|431
4WU1|1|1H|A|432
4WU1|1|1H|C|433

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain P8

50S ribosomal protein L34