J6_5ADY_002
3D structure
- PDB id
- 5ADY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of the 50S ribosome subunit bound with HflX
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- CCUUUACUAU*GUAGUUUGAC*GUCUC*GAGCA*UCAUAGUGAUCC*GCUCAACGGAUAAAAGG
- Length
- 59 nucleotides
- Bulged bases
- 5ADY|1|B|U|2076, 5ADY|1|B|U|2390, 5ADY|1|B|G|2428, 5ADY|1|B|A|2430, 5ADY|1|B|U|2431
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5ADY|1|B|C|2072
5ADY|1|B|C|2073
5ADY|1|B|U|2074
5ADY|1|B|U|2075
5ADY|1|B|U|2076
5ADY|1|B|A|2077
5ADY|1|B|C|2078
5ADY|1|B|U|2079
5ADY|1|B|A|2080
5ADY|1|B|U|2081
*
5ADY|1|B|G|2239
5ADY|1|B|U|2240
5ADY|1|B|A|2241
5ADY|1|B|G|2242
5ADY|1|B|U|2243
5ADY|1|B|U|2244
5ADY|1|B|U|2245
5ADY|1|B|G|2246
5ADY|1|B|A|2247
5ADY|1|B|C|2248
*
5ADY|1|B|G|2256
5ADY|1|B|U|2257
5ADY|1|B|C|2258
5ADY|1|B|U|2259
5ADY|1|B|C|2260
*
5ADY|1|B|G|2280
5ADY|1|B|A|2281
5ADY|1|B|G|2282
5ADY|1|B|C|2283
5ADY|1|B|A|2284
*
5ADY|1|B|U|2384
5ADY|1|B|C|2385
5ADY|1|B|A|2386
5ADY|1|B|U|2387
5ADY|1|B|A|2388
5ADY|1|B|G|2389
5ADY|1|B|U|2390
5ADY|1|B|G|2391
5ADY|1|B|A|2392
5ADY|1|B|U|2393
5ADY|1|B|C|2394
5ADY|1|B|C|2395
*
5ADY|1|B|G|2421
5ADY|1|B|C|2422
5ADY|1|B|U|2423
5ADY|1|B|C|2424
5ADY|1|B|A|2425
5ADY|1|B|A|2426
5ADY|1|B|C|2427
5ADY|1|B|G|2428
5ADY|1|B|G|2429
5ADY|1|B|A|2430
5ADY|1|B|U|2431
5ADY|1|B|A|2432
5ADY|1|B|A|2433
5ADY|1|B|A|2434
5ADY|1|B|A|2435
5ADY|1|B|G|2436
5ADY|1|B|G|2437
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain 1
- 50S RIBOSOMAL PROTEIN L33
- Chain 3
- 50S RIBOSOMAL PROTEIN L35
- Chain C
- 50S RIBOSOMAL PROTEIN L2
- Chain L
- 50S RIBOSOMAL PROTEIN L15
- Chain M
- 50S RIBOSOMAL PROTEIN L16
- Chain W
- 50S RIBOSOMAL PROTEIN L27
- Chain X
- 50S RIBOSOMAL PROTEIN L28
Coloring options: