J6_5AJ4_001
3D structure
- PDB id
- 5AJ4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 55S mammalian mitoribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GAGAAAG*CAACC*GAGAUAGU*AAACG*CUUGAC*GCCCAAUACC
- Length
- 41 nucleotides
- Bulged bases
- 5AJ4|1|BA|A|367, 5AJ4|1|BA|A|431, 5AJ4|1|BA|C|459, 5AJ4|1|BA|C|591
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5AJ4|1|BA|G|362
5AJ4|1|BA|A|363
5AJ4|1|BA|G|364
5AJ4|1|BA|A|365
5AJ4|1|BA|A|366
5AJ4|1|BA|A|367
5AJ4|1|BA|G|368
*
5AJ4|1|BA|C|379
5AJ4|1|BA|A|380
5AJ4|1|BA|A|381
5AJ4|1|BA|C|382
5AJ4|1|BA|C|383
*
5AJ4|1|BA|G|426
5AJ4|1|BA|A|427
5AJ4|1|BA|G|428
5AJ4|1|BA|A|429
5AJ4|1|BA|U|430
5AJ4|1|BA|A|431
5AJ4|1|BA|G|432
5AJ4|1|BA|U|433
*
5AJ4|1|BA|A|456
5AJ4|1|BA|A|457
5AJ4|1|BA|A|458
5AJ4|1|BA|C|459
5AJ4|1|BA|G|460
*
5AJ4|1|BA|C|469
5AJ4|1|BA|U|470
5AJ4|1|BA|U|471
5AJ4|1|BA|G|472
5AJ4|1|BA|A|473
5AJ4|1|BA|C|474
*
5AJ4|1|BA|G|590
5AJ4|1|BA|C|591
5AJ4|1|BA|C|592
5AJ4|1|BA|C|593
5AJ4|1|BA|A|594
5AJ4|1|BA|A|595
5AJ4|1|BA|U|596
5AJ4|1|BA|A|597
5AJ4|1|BA|C|598
5AJ4|1|BA|C|599
Current chains
- Chain BA
- MITORIBOSOMAL 16S Ribosomal RNA
Nearby chains
- Chain B0
- MITORIBOSOMAL PROTEIN BL27M, MRPL27
- Chain B3
- MITORIBOSOMAL PROTEIN UL30M, MRPL30
- Chain B8
- MITORIBOSOMAL PROTEIN BL35M, MRPL35
- Chain BJ
- MITORIBOSOMAL PROTEIN UL10M, MRPL10
- Chain BP
- MITORIBOSOMAL PROTEIN UL15M, MRPL15
- Chain BQ
- MITORIBOSOMAL PROTEIN UL16M, MRPL16
- Chain BU
- MITORIBOSOMAL PROTEIN BL20M, MRPL20
- Chain BV
- MITORIBOSOMAL PROTEIN BL21M, MRPL21
- Chain Bn
- MITORIBOSOMAL PROTEIN ML51, MRPL51
- Chain Bo
- MITORIBOSOMAL PROTEIN ML52, MRPL52
- Chain Bt
- MITORIBOSOMAL PROTEIN ML63, MRPL57
Coloring options: