J6_5E7K_003

3D structure

PDB id

5E7K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

5E7K|1|1H|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5E7K|1|1H|G|45
5E7K|1|1H|C|46
*
5E7K|1|1H|G|179
5E7K|1|1H|G|180
5E7K|1|1H|A|181
5E7K|1|1H|A|182
5E7K|1|1H|C|183
*
5E7K|1|1H|G|214
5E7K|1|1H|G|215
5E7K|1|1H|A|216
5E7K|1|1H|G|217
5E7K|1|1H|A|218
5E7K|1|1H|G|219
5E7K|1|1H|G|220
5E7K|1|1H|A|221
5E7K|1|1H|A|222
5E7K|1|1H|A|223
5E7K|1|1H|G|224
*
5E7K|1|1H|C|231
5E7K|1|1H|G|232
5E7K|1|1H|A|233
5E7K|1|1H|C|234
5E7K|1|1H|U|235
*
5E7K|1|1H|A|262
5E7K|1|1H|C|263
5E7K|1|1H|C|264
5E7K|1|1H|A|265
5E7K|1|1H|G|266
*
5E7K|1|1H|C|426
5E7K|1|1H|U|427
5E7K|1|1H|A|428
5E7K|1|1H|A|429
5E7K|1|1H|G|430
5E7K|1|1H|U|431
5E7K|1|1H|A|432
5E7K|1|1H|C|433

Current chains

Chain 1H

23S rRNA

Nearby chains

Chain P8

50S ribosomal protein L34