J6_5EL4_001

3D structure

PDB id

5EL4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

5EL4|1|14|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5EL4|1|14|G|45
5EL4|1|14|C|46
*
5EL4|1|14|G|179
5EL4|1|14|G|180
5EL4|1|14|A|181
5EL4|1|14|A|182
5EL4|1|14|C|183
*
5EL4|1|14|G|214
5EL4|1|14|G|215
5EL4|1|14|A|216
5EL4|1|14|G|217
5EL4|1|14|A|218
5EL4|1|14|G|219
5EL4|1|14|G|220
5EL4|1|14|A|221
5EL4|1|14|A|222
5EL4|1|14|A|223
5EL4|1|14|G|224
*
5EL4|1|14|C|231
5EL4|1|14|G|232
5EL4|1|14|A|233
5EL4|1|14|C|234
5EL4|1|14|U|235
*
5EL4|1|14|A|262
5EL4|1|14|C|263
5EL4|1|14|C|264
5EL4|1|14|A|265
5EL4|1|14|G|266
*
5EL4|1|14|C|426
5EL4|1|14|U|427
5EL4|1|14|A|428
5EL4|1|14|A|429
5EL4|1|14|G|430
5EL4|1|14|U|431
5EL4|1|14|A|432
5EL4|1|14|C|433

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain L5

50S ribosomal protein L34