3D structure

PDB id
5EL4 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position
Experimental method
X-RAY DIFFRACTION
Resolution
3.15 Å

Loop

Sequence
GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC
Length
36 nucleotides
Bulged bases
5EL4|1|14|A|223
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5EL4|1|14|G|45
5EL4|1|14|C|46
*
5EL4|1|14|G|179
5EL4|1|14|G|180
5EL4|1|14|A|181
5EL4|1|14|A|182
5EL4|1|14|C|183
*
5EL4|1|14|G|214
5EL4|1|14|G|215
5EL4|1|14|A|216
5EL4|1|14|G|217
5EL4|1|14|A|218
5EL4|1|14|G|219
5EL4|1|14|G|220
5EL4|1|14|A|221
5EL4|1|14|A|222
5EL4|1|14|A|223
5EL4|1|14|G|224
*
5EL4|1|14|C|231
5EL4|1|14|G|232
5EL4|1|14|A|233
5EL4|1|14|C|234
5EL4|1|14|U|235
*
5EL4|1|14|A|262
5EL4|1|14|C|263
5EL4|1|14|C|264
5EL4|1|14|A|265
5EL4|1|14|G|266
*
5EL4|1|14|C|426
5EL4|1|14|U|427
5EL4|1|14|A|428
5EL4|1|14|A|429
5EL4|1|14|G|430
5EL4|1|14|U|431
5EL4|1|14|A|432
5EL4|1|14|C|433

Current chains

Chain 14
23S ribosomal RNA

Nearby chains

Chain L5
50S ribosomal protein L34

Coloring options:

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