J6_5EL5_001

3D structure

PDB id

5EL5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

5EL5|1|14|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5EL5|1|14|G|45
5EL5|1|14|C|46
*
5EL5|1|14|G|179
5EL5|1|14|G|180
5EL5|1|14|A|181
5EL5|1|14|A|182
5EL5|1|14|C|183
*
5EL5|1|14|G|214
5EL5|1|14|G|215
5EL5|1|14|A|216
5EL5|1|14|G|217
5EL5|1|14|A|218
5EL5|1|14|G|219
5EL5|1|14|G|220
5EL5|1|14|A|221
5EL5|1|14|A|222
5EL5|1|14|A|223
5EL5|1|14|G|224
*
5EL5|1|14|C|231
5EL5|1|14|G|232
5EL5|1|14|A|233
5EL5|1|14|C|234
5EL5|1|14|U|235
*
5EL5|1|14|A|262
5EL5|1|14|C|263
5EL5|1|14|C|264
5EL5|1|14|A|265
5EL5|1|14|G|266
*
5EL5|1|14|C|426
5EL5|1|14|U|427
5EL5|1|14|A|428
5EL5|1|14|A|429
5EL5|1|14|G|430
5EL5|1|14|U|431
5EL5|1|14|A|432
5EL5|1|14|C|433

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain L5

50S ribosomal protein L34