J6_5J3C_001

3D structure

PDB id

5J3C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S termination complex containing E. coli RF1

Experimental method

X-RAY DIFFRACTION

Resolution

3.04 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

5J3C|1|RA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5J3C|1|RA|G|44
5J3C|1|RA|C|45
*
5J3C|1|RA|G|179
5J3C|1|RA|G|180
5J3C|1|RA|A|181
5J3C|1|RA|A|182
5J3C|1|RA|C|183
*
5J3C|1|RA|G|214
5J3C|1|RA|G|215
5J3C|1|RA|A|216
5J3C|1|RA|G|217
5J3C|1|RA|A|218
5J3C|1|RA|G|219
5J3C|1|RA|G|220
5J3C|1|RA|A|221
5J3C|1|RA|A|222
5J3C|1|RA|A|223
5J3C|1|RA|G|224
*
5J3C|1|RA|C|231
5J3C|1|RA|G|232
5J3C|1|RA|A|233
5J3C|1|RA|C|234
5J3C|1|RA|U|235
*
5J3C|1|RA|A|262
5J3C|1|RA|C|263
5J3C|1|RA|C|264
5J3C|1|RA|A|265
5J3C|1|RA|G|266
*
5J3C|1|RA|C|426
5J3C|1|RA|U|427
5J3C|1|RA|A|428
5J3C|1|RA|A|429
5J3C|1|RA|G|430
5J3C|1|RA|U|431
5J3C|1|RA|A|432
5J3C|1|RA|C|433

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R7

50S ribosomal protein L34