J6_5KPW_001

3D structure

PDB id

5KPW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

5KPW|1|27|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5KPW|1|27|G|45
5KPW|1|27|G|46
*
5KPW|1|27|C|179
5KPW|1|27|G|180
5KPW|1|27|A|181
5KPW|1|27|A|182
5KPW|1|27|C|183
*
5KPW|1|27|G|214
5KPW|1|27|G|215
5KPW|1|27|A|216
5KPW|1|27|A|217
5KPW|1|27|A|218
5KPW|1|27|A|219
5KPW|1|27|G|220
5KPW|1|27|A|221
5KPW|1|27|A|222
5KPW|1|27|A|223
5KPW|1|27|U|224
*
5KPW|1|27|A|231
5KPW|1|27|G|232
5KPW|1|27|A|233
5KPW|1|27|U|234
5KPW|1|27|U|235
*
5KPW|1|27|A|262
5KPW|1|27|G|263
5KPW|1|27|C|264
5KPW|1|27|A|265
5KPW|1|27|G|266
*
5KPW|1|27|C|426
5KPW|1|27|U|427
5KPW|1|27|A|428
5KPW|1|27|A|429
5KPW|1|27|A|430
5KPW|1|27|U|431
5KPW|1|27|A|432
5KPW|1|27|C|433

Current chains

Chain 27

23S ribosomal RNA

Nearby chains

Chain 3

50S ribosomal protein L34