J6_5KPX_001

3D structure

PDB id

5KPX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

5KPX|1|27|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5KPX|1|27|G|45
5KPX|1|27|G|46
*
5KPX|1|27|C|179
5KPX|1|27|G|180
5KPX|1|27|A|181
5KPX|1|27|A|182
5KPX|1|27|C|183
*
5KPX|1|27|G|214
5KPX|1|27|G|215
5KPX|1|27|A|216
5KPX|1|27|A|217
5KPX|1|27|A|218
5KPX|1|27|A|219
5KPX|1|27|G|220
5KPX|1|27|A|221
5KPX|1|27|A|222
5KPX|1|27|A|223
5KPX|1|27|U|224
*
5KPX|1|27|A|231
5KPX|1|27|G|232
5KPX|1|27|A|233
5KPX|1|27|U|234
5KPX|1|27|U|235
*
5KPX|1|27|A|262
5KPX|1|27|G|263
5KPX|1|27|C|264
5KPX|1|27|A|265
5KPX|1|27|G|266
*
5KPX|1|27|C|426
5KPX|1|27|U|427
5KPX|1|27|A|428
5KPX|1|27|A|429
5KPX|1|27|A|430
5KPX|1|27|U|431
5KPX|1|27|A|432
5KPX|1|27|C|433

Current chains

Chain 27

23S ribosomal RNA

Nearby chains

Chain 3

50S ribosomal protein L34