J6_5LZZ_001
3D structure
- PDB id
- 5LZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian rescue complex with Pelota and Hbs1l (combined)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.47 Å
Loop
- Sequence
- GGCGAC*GGAAAAGAAAC*GGAUU*AAGAG*CUAAAUAC*GUC
- Length
- 38 nucleotides
- Bulged bases
- 5LZZ|1|5|A|66, 5LZZ|1|8|U|34
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LZZ|1|5|G|21
5LZZ|1|5|G|22
5LZZ|1|5|C|23
5LZZ|1|5|G|24
5LZZ|1|5|A|25
5LZZ|1|5|C|26
*
5LZZ|1|5|G|57
5LZZ|1|5|G|58
5LZZ|1|5|A|59
5LZZ|1|5|A|60
5LZZ|1|5|A|61
5LZZ|1|5|A|62
5LZZ|1|5|G|63
5LZZ|1|5|A|64
5LZZ|1|5|A|65
5LZZ|1|5|A|66
5LZZ|1|5|C|67
*
5LZZ|1|5|G|74
5LZZ|1|5|G|75
5LZZ|1|5|A|76
5LZZ|1|5|U|77
5LZZ|1|5|U|78
*
5LZZ|1|5|A|105
5LZZ|1|5|A|106
5LZZ|1|5|G|107
5LZZ|1|5|A|108
5LZZ|1|5|G|109
*
5LZZ|1|5|C|332
5LZZ|1|5|U|333
5LZZ|1|5|A|334
5LZZ|1|5|A|335
5LZZ|1|5|A|336
5LZZ|1|5|U|337
5LZZ|1|5|A|338
5LZZ|1|5|C|339
*
5LZZ|1|8|G|33
5LZZ|1|8|U|34
5LZZ|1|8|C|35
Current chains
- Chain 5
- 28S ribosomal RNA
- Chain 8
- 5.8S ribosomal RNA
Nearby chains
- Chain L
- eL13
- Chain N
- Ribosomal protein L15
- Chain h
- uL29
- Chain i
- 60S ribosomal protein L36
- Chain j
- Ribosomal protein L37
Coloring options: