J6_5MRF_001
3D structure
- PDB id
- 5MRF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial ribosome - Class C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.97 Å
Loop
- Sequence
- CAUAAA*UAAAUUG*UAGUAAUAGAUAAAAAU*AUAAU*AGU*AUG
- Length
- 41 nucleotides
- Bulged bases
- 5MRF|1|A|A|2316, 5MRF|1|A|U|2379, 5MRF|1|A|U|2380, 5MRF|1|A|U|2424, 5MRF|1|A|A|2425, 5MRF|1|A|A|2426, 5MRF|1|A|U|2427, 5MRF|1|A|A|2428, 5MRF|1|A|A|2430, 5MRF|1|A|A|2432, 5MRF|1|A|A|2433, 5MRF|1|A|U|2611
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5MRF|1|A|C|2312
5MRF|1|A|A|2313
5MRF|1|A|U|2314
5MRF|1|A|A|2315
5MRF|1|A|A|2316
5MRF|1|A|A|2317
*
5MRF|1|A|U|2375
5MRF|1|A|A|2376
5MRF|1|A|A|2377
5MRF|1|A|A|2378
5MRF|1|A|U|2379
5MRF|1|A|U|2380
5MRF|1|A|G|2381
*
5MRF|1|A|U|2421
5MRF|1|A|A|2422
5MRF|1|A|G|2423
5MRF|1|A|U|2424
5MRF|1|A|A|2425
5MRF|1|A|A|2426
5MRF|1|A|U|2427
5MRF|1|A|A|2428
5MRF|1|A|G|2429
5MRF|1|A|A|2430
5MRF|1|A|U|2431
5MRF|1|A|A|2432
5MRF|1|A|A|2433
5MRF|1|A|A|2434
5MRF|1|A|A|2435
5MRF|1|A|A|2436
5MRF|1|A|U|2437
*
5MRF|1|A|A|2610
5MRF|1|A|U|2611
5MRF|1|A|A|2612
5MRF|1|A|A|2613
5MRF|1|A|U|2614
*
5MRF|1|A|A|2637
5MRF|1|A|G|2638
5MRF|1|A|U|2639
*
5MRF|1|A|A|2648
5MRF|1|A|U|2649
5MRF|1|A|G|2650
Current chains
- Chain A
- 21S ribosomal RNA
Nearby chains
- Chain 1
- mL38
- Chain 2
- mL40
- Chain 6
- mL46
- Chain E
- uL5m
- Chain R
- bL27m
- Chain V
- bL31m
- Chain X
- bL33m
- Chain Z
- bL35m
- Chain b
- mL59
Coloring options: