J6_5UYM_001
3D structure
- PDB id
- 5UYM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC
- Length
- 36 nucleotides
- Bulged bases
- 5UYM|1|01|A|223
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5UYM|1|01|G|45
5UYM|1|01|G|46
*
5UYM|1|01|C|179
5UYM|1|01|G|180
5UYM|1|01|A|181
5UYM|1|01|A|182
5UYM|1|01|C|183
*
5UYM|1|01|G|214
5UYM|1|01|G|215
5UYM|1|01|A|216
5UYM|1|01|A|217
5UYM|1|01|A|218
5UYM|1|01|A|219
5UYM|1|01|G|220
5UYM|1|01|A|221
5UYM|1|01|A|222
5UYM|1|01|A|223
5UYM|1|01|U|224
*
5UYM|1|01|A|231
5UYM|1|01|G|232
5UYM|1|01|A|233
5UYM|1|01|U|234
5UYM|1|01|U|235
*
5UYM|1|01|A|262
5UYM|1|01|G|263
5UYM|1|01|C|264
5UYM|1|01|A|265
5UYM|1|01|G|266
*
5UYM|1|01|C|426
5UYM|1|01|U|427
5UYM|1|01|A|428
5UYM|1|01|A|429
5UYM|1|01|A|430
5UYM|1|01|U|431
5UYM|1|01|A|432
5UYM|1|01|C|433
Current chains
- Chain 01
- 23S ribosomal RNA
Nearby chains
- Chain 32
- 50S ribosomal protein L34
Coloring options: