J6_5W4K_001
3D structure
- PDB id
- 5W4K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC
- Length
- 36 nucleotides
- Bulged bases
- 5W4K|1|1A|A|212
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5W4K|1|1A|G|44
5W4K|1|1A|C|45
*
5W4K|1|1A|G|168
5W4K|1|1A|G|169
5W4K|1|1A|A|170
5W4K|1|1A|A|171
5W4K|1|1A|C|172
*
5W4K|1|1A|G|203
5W4K|1|1A|G|204
5W4K|1|1A|A|205
5W4K|1|1A|G|206
5W4K|1|1A|A|207
5W4K|1|1A|G|208
5W4K|1|1A|G|209
5W4K|1|1A|A|210
5W4K|1|1A|A|211
5W4K|1|1A|A|212
5W4K|1|1A|G|213
*
5W4K|1|1A|C|220
5W4K|1|1A|G|221
5W4K|1|1A|A|222
5W4K|1|1A|C|223
5W4K|1|1A|U|224
*
5W4K|1|1A|A|251
5W4K|1|1A|C|252
5W4K|1|1A|C|253
5W4K|1|1A|A|254
5W4K|1|1A|G|255
*
5W4K|1|1A|C|453
5W4K|1|1A|U|454
5W4K|1|1A|A|455
5W4K|1|1A|A|456
5W4K|1|1A|G|457
5W4K|1|1A|U|458
5W4K|1|1A|A|459
5W4K|1|1A|C|460
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 17
- 50S ribosomal protein L34
Coloring options: