J6_5WDT_001

3D structure

PDB id

5WDT (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GppNHp

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGGAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

5WDT|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WDT|1|A|G|45
5WDT|1|A|G|46
*
5WDT|1|A|C|179
5WDT|1|A|G|180
5WDT|1|A|A|181
5WDT|1|A|A|182
5WDT|1|A|C|183
*
5WDT|1|A|G|214
5WDT|1|A|G|215
5WDT|1|A|A|216
5WDT|1|A|A|217
5WDT|1|A|A|218
5WDT|1|A|A|219
5WDT|1|A|G|220
5WDT|1|A|A|221
5WDT|1|A|A|222
5WDT|1|A|A|223
5WDT|1|A|U|224
*
5WDT|1|A|A|231
5WDT|1|A|G|232
5WDT|1|A|A|233
5WDT|1|A|U|234
5WDT|1|A|U|235
*
5WDT|1|A|A|262
5WDT|1|A|G|263
5WDT|1|A|G|264
5WDT|1|A|A|265
5WDT|1|A|G|266
*
5WDT|1|A|C|426
5WDT|1|A|U|427
5WDT|1|A|A|428
5WDT|1|A|A|429
5WDT|1|A|A|430
5WDT|1|A|U|431
5WDT|1|A|A|432
5WDT|1|A|C|433

Current chains

Chain A

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L34