J6_5WIS_003

3D structure

PDB id

5WIS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

5WIS|1|2A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WIS|1|2A|G|44
5WIS|1|2A|C|45
*
5WIS|1|2A|G|179
5WIS|1|2A|G|180
5WIS|1|2A|A|181
5WIS|1|2A|A|182
5WIS|1|2A|C|183
*
5WIS|1|2A|G|214
5WIS|1|2A|G|215
5WIS|1|2A|A|216
5WIS|1|2A|G|217
5WIS|1|2A|A|218
5WIS|1|2A|G|219
5WIS|1|2A|G|220
5WIS|1|2A|A|221
5WIS|1|2A|A|222
5WIS|1|2A|A|223
5WIS|1|2A|G|224
*
5WIS|1|2A|C|231
5WIS|1|2A|G|232
5WIS|1|2A|A|233
5WIS|1|2A|C|234
5WIS|1|2A|U|235
*
5WIS|1|2A|A|262
5WIS|1|2A|C|263
5WIS|1|2A|C|264
5WIS|1|2A|A|265
5WIS|1|2A|G|266
*
5WIS|1|2A|C|426
5WIS|1|2A|U|427
5WIS|1|2A|A|428
5WIS|1|2A|A|429
5WIS|1|2A|G|430
5WIS|1|2A|U|431
5WIS|1|2A|A|432
5WIS|1|2A|C|433

Current chains

Chain 2A

23S ribosomal RNA

Nearby chains

Chain 27

50S ribosomal protein L34