J6_6BOK_002
3D structure
- PDB id
- 6BOK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- UUUA*UUUG*CG*CGCC*GCCUAGUGAACC*GAUCAACGGAUAAAA
- Length
- 41 nucleotides
- Bulged bases
- 6BOK|1|B|U|2076, 6BOK|1|B|A|2388, 6BOK|1|B|G|2428, 6BOK|1|B|A|2430, 6BOK|1|B|U|2431
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6BOK|1|B|U|2074
6BOK|1|B|U|2075
6BOK|1|B|U|2076
6BOK|1|B|A|2077
*
6BOK|1|B|U|2243
6BOK|1|B|U|2244
6BOK|1|B|U|2245
6BOK|1|B|G|2246
*
6BOK|1|B|C|2258
6BOK|1|B|G|2259
*
6BOK|1|B|C|2281
6BOK|1|B|G|2282
6BOK|1|B|C|2283
6BOK|1|B|C|2284
*
6BOK|1|B|G|2384
6BOK|1|B|C|2385
6BOK|1|B|C|2386
6BOK|1|B|U|2387
6BOK|1|B|A|2388
6BOK|1|B|G|2389
6BOK|1|B|U|2390
6BOK|1|B|G|2391
6BOK|1|B|A|2392
6BOK|1|B|A|2393
6BOK|1|B|C|2394
6BOK|1|B|C|2395
*
6BOK|1|B|G|2421
6BOK|1|B|A|2422
6BOK|1|B|U|2423
6BOK|1|B|C|2424
6BOK|1|B|A|2425
6BOK|1|B|A|2426
6BOK|1|B|C|2427
6BOK|1|B|G|2428
6BOK|1|B|G|2429
6BOK|1|B|A|2430
6BOK|1|B|U|2431
6BOK|1|B|A|2432
6BOK|1|B|A|2433
6BOK|1|B|A|2434
6BOK|1|B|A|2435
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain D
- Small subunit ribosomal RNA fragment; SSU rRNA fragment
- Chain DA
- 50S ribosomal protein L33
- Chain E
- 50S ribosomal protein L2
- Chain FA
- 50S ribosomal protein L35
- Chain M
- 50S ribosomal protein L15
- Chain X
- 50S ribosomal protein L27
- Chain Y
- 50S ribosomal protein L28
Coloring options: