J6_6BOK_003

3D structure

PDB id

6BOK (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.55 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

6BOK|1|EB|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6BOK|1|EB|G|45
6BOK|1|EB|C|46
*
6BOK|1|EB|G|179
6BOK|1|EB|G|180
6BOK|1|EB|A|181
6BOK|1|EB|A|182
6BOK|1|EB|C|183
*
6BOK|1|EB|G|214
6BOK|1|EB|G|215
6BOK|1|EB|A|216
6BOK|1|EB|G|217
6BOK|1|EB|A|218
6BOK|1|EB|G|219
6BOK|1|EB|G|220
6BOK|1|EB|A|221
6BOK|1|EB|A|222
6BOK|1|EB|A|223
6BOK|1|EB|G|224
*
6BOK|1|EB|C|231
6BOK|1|EB|G|232
6BOK|1|EB|A|233
6BOK|1|EB|C|234
6BOK|1|EB|U|235
*
6BOK|1|EB|A|262
6BOK|1|EB|C|263
6BOK|1|EB|C|264
6BOK|1|EB|A|265
6BOK|1|EB|G|266
*
6BOK|1|EB|C|426
6BOK|1|EB|U|427
6BOK|1|EB|A|428
6BOK|1|EB|A|429
6BOK|1|EB|G|430
6BOK|1|EB|U|431
6BOK|1|EB|A|432
6BOK|1|EB|C|433

Current chains

Chain EB

23S ribosomal RNA

Nearby chains

Chain HC

50S ribosomal protein L34