3D structure

PDB id
6BUW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S complex containing 16S G299A ram mutation and empty A site.
Experimental method
X-RAY DIFFRACTION
Resolution
3.5 Å

Loop

Sequence
GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC
Length
36 nucleotides
Bulged bases
6BUW|1|YA|A|223
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6BUW|1|YA|G|45
6BUW|1|YA|C|46
*
6BUW|1|YA|G|179
6BUW|1|YA|G|180
6BUW|1|YA|A|181
6BUW|1|YA|A|182
6BUW|1|YA|C|183
*
6BUW|1|YA|G|214
6BUW|1|YA|G|215
6BUW|1|YA|A|216
6BUW|1|YA|G|217
6BUW|1|YA|A|218
6BUW|1|YA|G|219
6BUW|1|YA|G|220
6BUW|1|YA|A|221
6BUW|1|YA|A|222
6BUW|1|YA|A|223
6BUW|1|YA|G|224
*
6BUW|1|YA|C|231
6BUW|1|YA|G|232
6BUW|1|YA|A|233
6BUW|1|YA|C|234
6BUW|1|YA|U|235
*
6BUW|1|YA|A|262
6BUW|1|YA|C|263
6BUW|1|YA|C|264
6BUW|1|YA|A|265
6BUW|1|YA|G|266
*
6BUW|1|YA|C|426
6BUW|1|YA|U|427
6BUW|1|YA|A|428
6BUW|1|YA|A|429
6BUW|1|YA|G|430
6BUW|1|YA|U|431
6BUW|1|YA|A|432
6BUW|1|YA|C|433

Current chains

Chain YA
23S rRNA

Nearby chains

Chain Y7
50S ribosomal protein L34

Coloring options:

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