J6_6CAE_003

3D structure

PDB id

6CAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

6CAE|1|2A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6CAE|1|2A|G|44
6CAE|1|2A|C|45
*
6CAE|1|2A|G|179
6CAE|1|2A|G|180
6CAE|1|2A|A|181
6CAE|1|2A|A|182
6CAE|1|2A|C|183
*
6CAE|1|2A|G|214
6CAE|1|2A|G|215
6CAE|1|2A|A|216
6CAE|1|2A|G|217
6CAE|1|2A|A|218
6CAE|1|2A|G|219
6CAE|1|2A|G|220
6CAE|1|2A|A|221
6CAE|1|2A|A|222
6CAE|1|2A|A|223
6CAE|1|2A|G|224
*
6CAE|1|2A|C|231
6CAE|1|2A|G|232
6CAE|1|2A|A|233
6CAE|1|2A|C|234
6CAE|1|2A|U|235
*
6CAE|1|2A|A|262
6CAE|1|2A|C|263
6CAE|1|2A|C|264
6CAE|1|2A|A|265
6CAE|1|2A|G|266
*
6CAE|1|2A|C|426
6CAE|1|2A|U|427
6CAE|1|2A|A|428
6CAE|1|2A|A|429
6CAE|1|2A|G|430
6CAE|1|2A|U|431
6CAE|1|2A|A|432
6CAE|1|2A|C|433

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 27

50S ribosomal protein L34