J6_6CZR_005

3D structure

PDB id

6CZR (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of amicetin bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.14 Å

Loop

Sequence

GC*GGAACC*GAGGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

39 nucleotides

Bulged bases

6CZR|1|2A|A|211

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6CZR|1|2A|G|43
6CZR|1|2A|C|44
*
6CZR|1|2A|G|167
6CZR|1|2A|G|168
6CZR|1|2A|A|169
6CZR|1|2A|A|170
6CZR|1|2A|C|171
6CZR|1|2A|C|172
*
6CZR|1|2A|G|200
6CZR|1|2A|A|201
6CZR|1|2A|G|202
6CZR|1|2A|G|203
6CZR|1|2A|A|204
6CZR|1|2A|G|205
6CZR|1|2A|A|206
6CZR|1|2A|G|207
6CZR|1|2A|G|208
6CZR|1|2A|A|209
6CZR|1|2A|A|210
6CZR|1|2A|A|211
6CZR|1|2A|G|212
*
6CZR|1|2A|C|219
6CZR|1|2A|G|220
6CZR|1|2A|A|221
6CZR|1|2A|C|222
6CZR|1|2A|U|223
*
6CZR|1|2A|A|250
6CZR|1|2A|C|251
6CZR|1|2A|C|252
6CZR|1|2A|A|253
6CZR|1|2A|G|254
*
6CZR|1|2A|C|452
6CZR|1|2A|U|453
6CZR|1|2A|A|454
6CZR|1|2A|A|455
6CZR|1|2A|G|456
6CZR|1|2A|U|457
6CZR|1|2A|A|458
6CZR|1|2A|C|459

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 27

50S ribosomal protein L34