J6_6FTI_002
3D structure
- PDB id
- 6FTI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Programmed 80S Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- CGAG*CGCAA*UGAAG*CGAG*CGG*CACGAG
- Length
- 27 nucleotides
- Bulged bases
- 6FTI|1|u|C|1501
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6FTI|1|u|C|1352
6FTI|1|u|G|1353
6FTI|1|u|A|1354
6FTI|1|u|G|1355
*
6FTI|1|u|C|1384
6FTI|1|u|G|1385
6FTI|1|u|C|1386
6FTI|1|u|A|1387
6FTI|1|u|A|1388
*
6FTI|1|u|U|1395
6FTI|1|u|G|1396
6FTI|1|u|A|1397
6FTI|1|u|A|1398
6FTI|1|u|G|1399
*
6FTI|1|u|C|1418
6FTI|1|u|G|1419
6FTI|1|u|A|1420
6FTI|1|u|G|1421
*
6FTI|1|u|C|1464
6FTI|1|u|G|1465
6FTI|1|u|G|1466
*
6FTI|1|u|C|1499
6FTI|1|u|A|1500
6FTI|1|u|C|1501
6FTI|1|u|G|1502
6FTI|1|u|A|1503
6FTI|1|u|G|1504
Current chains
- Chain u
- 28S rRNA
Nearby chains
- Chain C
- Ribosomal protein L4
- Chain L
- eL13
- Chain Q
- uL14
- Chain a
- uL15
- Chain b
- 60S ribosomal protein L29
- Chain i
- 60S ribosomal protein L36
Coloring options: