J6_6GBZ_001

3D structure

PDB id

6GBZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit assembly intermediate state 5

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

6GBZ|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GBZ|1|A|G|45
6GBZ|1|A|G|46
*
6GBZ|1|A|C|179
6GBZ|1|A|G|180
6GBZ|1|A|A|181
6GBZ|1|A|A|182
6GBZ|1|A|C|183
*
6GBZ|1|A|G|214
6GBZ|1|A|G|215
6GBZ|1|A|A|216
6GBZ|1|A|A|217
6GBZ|1|A|A|218
6GBZ|1|A|A|219
6GBZ|1|A|G|220
6GBZ|1|A|A|221
6GBZ|1|A|A|222
6GBZ|1|A|A|223
6GBZ|1|A|U|224
*
6GBZ|1|A|A|231
6GBZ|1|A|G|232
6GBZ|1|A|A|233
6GBZ|1|A|U|234
6GBZ|1|A|U|235
*
6GBZ|1|A|A|262
6GBZ|1|A|G|263
6GBZ|1|A|C|264
6GBZ|1|A|A|265
6GBZ|1|A|G|266
*
6GBZ|1|A|C|426
6GBZ|1|A|U|427
6GBZ|1|A|A|428
6GBZ|1|A|A|429
6GBZ|1|A|A|430
6GBZ|1|A|U|431
6GBZ|1|A|A|432
6GBZ|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34