J6_6GSJ_001

3D structure

PDB id

6GSJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

2.96 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

6GSJ|1|14|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GSJ|1|14|G|45
6GSJ|1|14|C|46
*
6GSJ|1|14|G|179
6GSJ|1|14|G|180
6GSJ|1|14|A|181
6GSJ|1|14|A|182
6GSJ|1|14|C|183
*
6GSJ|1|14|G|214
6GSJ|1|14|G|215
6GSJ|1|14|A|216
6GSJ|1|14|G|217
6GSJ|1|14|A|218
6GSJ|1|14|G|219
6GSJ|1|14|G|220
6GSJ|1|14|A|221
6GSJ|1|14|A|222
6GSJ|1|14|A|223
6GSJ|1|14|G|224
*
6GSJ|1|14|C|231
6GSJ|1|14|G|232
6GSJ|1|14|A|233
6GSJ|1|14|C|234
6GSJ|1|14|U|235
*
6GSJ|1|14|A|262
6GSJ|1|14|C|263
6GSJ|1|14|C|264
6GSJ|1|14|A|265
6GSJ|1|14|G|266
*
6GSJ|1|14|C|426
6GSJ|1|14|U|427
6GSJ|1|14|A|428
6GSJ|1|14|A|429
6GSJ|1|14|G|430
6GSJ|1|14|U|431
6GSJ|1|14|A|432
6GSJ|1|14|C|433

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain L5

50S ribosomal protein L34