J6_6GSL_001

3D structure

PDB id

6GSL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.16 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

6GSL|1|14|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GSL|1|14|G|45
6GSL|1|14|C|46
*
6GSL|1|14|G|179
6GSL|1|14|G|180
6GSL|1|14|A|181
6GSL|1|14|A|182
6GSL|1|14|C|183
*
6GSL|1|14|G|214
6GSL|1|14|G|215
6GSL|1|14|A|216
6GSL|1|14|G|217
6GSL|1|14|A|218
6GSL|1|14|G|219
6GSL|1|14|G|220
6GSL|1|14|A|221
6GSL|1|14|A|222
6GSL|1|14|A|223
6GSL|1|14|G|224
*
6GSL|1|14|C|231
6GSL|1|14|G|232
6GSL|1|14|A|233
6GSL|1|14|C|234
6GSL|1|14|U|235
*
6GSL|1|14|A|262
6GSL|1|14|C|263
6GSL|1|14|C|264
6GSL|1|14|A|265
6GSL|1|14|G|266
*
6GSL|1|14|C|426
6GSL|1|14|U|427
6GSL|1|14|A|428
6GSL|1|14|A|429
6GSL|1|14|G|430
6GSL|1|14|U|431
6GSL|1|14|A|432
6GSL|1|14|C|433

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain L5

50S ribosomal protein L34