J6_6GWT_001

3D structure

PDB id

6GWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAUC*GAGAUU*AGCAG*CUAAAUAC

Length

38 nucleotides

Bulged bases

6GWT|1|A|A|223, 6GWT|1|A|C|264

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GWT|1|A|G|45
6GWT|1|A|G|46
*
6GWT|1|A|C|179
6GWT|1|A|G|180
6GWT|1|A|A|181
6GWT|1|A|A|182
6GWT|1|A|C|183
*
6GWT|1|A|G|214
6GWT|1|A|G|215
6GWT|1|A|A|216
6GWT|1|A|A|217
6GWT|1|A|A|218
6GWT|1|A|A|219
6GWT|1|A|G|220
6GWT|1|A|A|221
6GWT|1|A|A|222
6GWT|1|A|A|223
6GWT|1|A|U|224
6GWT|1|A|C|225
*
6GWT|1|A|G|230
6GWT|1|A|A|231
6GWT|1|A|G|232
6GWT|1|A|A|233
6GWT|1|A|U|234
6GWT|1|A|U|235
*
6GWT|1|A|A|262
6GWT|1|A|G|263
6GWT|1|A|C|264
6GWT|1|A|A|265
6GWT|1|A|G|266
*
6GWT|1|A|C|426
6GWT|1|A|U|427
6GWT|1|A|A|428
6GWT|1|A|A|429
6GWT|1|A|A|430
6GWT|1|A|U|431
6GWT|1|A|A|432
6GWT|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34