J6_6GZ5_002
3D structure
- PDB id
- 6GZ5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-3 (TI-POST-3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CGAG*CGCAA*UGAAG*CGAG*CGG*CACGAG
- Length
- 27 nucleotides
- Bulged bases
- 6GZ5|1|A2|C|1483
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GZ5|1|A2|C|1335
6GZ5|1|A2|G|1336
6GZ5|1|A2|A|1337
6GZ5|1|A2|G|1338
*
6GZ5|1|A2|C|1367
6GZ5|1|A2|G|1368
6GZ5|1|A2|C|1369
6GZ5|1|A2|A|1370
6GZ5|1|A2|A|1371
*
6GZ5|1|A2|U|1378
6GZ5|1|A2|G|1379
6GZ5|1|A2|A|1380
6GZ5|1|A2|A|1381
6GZ5|1|A2|G|1382
*
6GZ5|1|A2|C|1401
6GZ5|1|A2|G|1402
6GZ5|1|A2|A|1403
6GZ5|1|A2|G|1404
*
6GZ5|1|A2|C|1446
6GZ5|1|A2|G|1447
6GZ5|1|A2|G|1448
*
6GZ5|1|A2|C|1481
6GZ5|1|A2|A|1482
6GZ5|1|A2|C|1483
6GZ5|1|A2|G|1484
6GZ5|1|A2|A|1485
6GZ5|1|A2|G|1486
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain AC
- ribosomal protein uL4
- Chain AL
- ribosomal protein eL13
- Chain AQ
- ribosomal protein eL18
- Chain Aa
- ribosomal protein uL15
- Chain Ab
- ribosomal protein eL29
- Chain Ai
- ribosomal protein eL36
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