J6_6H4N_001

3D structure

PDB id

6H4N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

6H4N|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6H4N|1|A|G|45
6H4N|1|A|G|46
*
6H4N|1|A|C|179
6H4N|1|A|G|180
6H4N|1|A|A|181
6H4N|1|A|A|182
6H4N|1|A|C|183
*
6H4N|1|A|G|214
6H4N|1|A|G|215
6H4N|1|A|A|216
6H4N|1|A|A|217
6H4N|1|A|A|218
6H4N|1|A|A|219
6H4N|1|A|G|220
6H4N|1|A|A|221
6H4N|1|A|A|222
6H4N|1|A|A|223
6H4N|1|A|U|224
*
6H4N|1|A|A|231
6H4N|1|A|G|232
6H4N|1|A|A|233
6H4N|1|A|U|234
6H4N|1|A|U|235
*
6H4N|1|A|A|262
6H4N|1|A|G|263
6H4N|1|A|C|264
6H4N|1|A|A|265
6H4N|1|A|G|266
*
6H4N|1|A|C|426
6H4N|1|A|U|427
6H4N|1|A|A|428
6H4N|1|A|A|429
6H4N|1|A|A|430
6H4N|1|A|U|431
6H4N|1|A|A|432
6H4N|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34