J6_6I0Y_001

3D structure

PDB id

6I0Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

TnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnel

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

6I0Y|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6I0Y|1|A|G|45
6I0Y|1|A|G|46
*
6I0Y|1|A|C|179
6I0Y|1|A|G|180
6I0Y|1|A|A|181
6I0Y|1|A|A|182
6I0Y|1|A|C|183
*
6I0Y|1|A|G|214
6I0Y|1|A|G|215
6I0Y|1|A|A|216
6I0Y|1|A|A|217
6I0Y|1|A|A|218
6I0Y|1|A|A|219
6I0Y|1|A|G|220
6I0Y|1|A|A|221
6I0Y|1|A|A|222
6I0Y|1|A|A|223
6I0Y|1|A|U|224
*
6I0Y|1|A|A|231
6I0Y|1|A|G|232
6I0Y|1|A|A|233
6I0Y|1|A|U|234
6I0Y|1|A|U|235
*
6I0Y|1|A|A|262
6I0Y|1|A|G|263
6I0Y|1|A|C|264
6I0Y|1|A|A|265
6I0Y|1|A|G|266
*
6I0Y|1|A|C|426
6I0Y|1|A|U|427
6I0Y|1|A|A|428
6I0Y|1|A|A|429
6I0Y|1|A|A|430
6I0Y|1|A|U|431
6I0Y|1|A|A|432
6I0Y|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34