J6_6NDK_002
3D structure
- PDB id
- 6NDK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ASLSufA6 A37.5 bound to the 70S A site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.64 Å
Loop
- Sequence
- GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC
- Length
- 36 nucleotides
- Bulged bases
- 6NDK|1|YA|A|223
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6NDK|1|YA|G|44
6NDK|1|YA|C|45
*
6NDK|1|YA|G|179
6NDK|1|YA|G|180
6NDK|1|YA|A|181
6NDK|1|YA|A|182
6NDK|1|YA|C|183
*
6NDK|1|YA|G|214
6NDK|1|YA|G|215
6NDK|1|YA|A|216
6NDK|1|YA|G|217
6NDK|1|YA|A|218
6NDK|1|YA|G|219
6NDK|1|YA|G|220
6NDK|1|YA|A|221
6NDK|1|YA|A|222
6NDK|1|YA|A|223
6NDK|1|YA|G|224
*
6NDK|1|YA|C|231
6NDK|1|YA|G|232
6NDK|1|YA|A|233
6NDK|1|YA|C|234
6NDK|1|YA|U|235
*
6NDK|1|YA|A|262
6NDK|1|YA|C|263
6NDK|1|YA|C|264
6NDK|1|YA|A|265
6NDK|1|YA|G|266
*
6NDK|1|YA|C|426
6NDK|1|YA|U|427
6NDK|1|YA|A|428
6NDK|1|YA|A|429
6NDK|1|YA|G|430
6NDK|1|YA|U|431
6NDK|1|YA|A|432
6NDK|1|YA|C|433
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain Y7
- 50S ribosomal protein L34
Coloring options: