J6_6O8Z_002
3D structure
- PDB id
- 6O8Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class04
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.49 Å
Loop
- Sequence
- UUUA*UUUG*CG*CGCC*GCUUAGUGAUCC*GCUCAACGGAUAAAA
- Length
- 41 nucleotides
- Bulged bases
- 6O8Z|1|A|U|2090, 6O8Z|1|A|U|2404, 6O8Z|1|A|G|2442, 6O8Z|1|A|A|2444, 6O8Z|1|A|U|2445, 6O8Z|1|A|A|2448
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6O8Z|1|A|U|2088
6O8Z|1|A|U|2089
6O8Z|1|A|U|2090
6O8Z|1|A|A|2091
*
6O8Z|1|A|U|2257
6O8Z|1|A|U|2258
6O8Z|1|A|U|2259
6O8Z|1|A|G|2260
*
6O8Z|1|A|C|2272
6O8Z|1|A|G|2273
*
6O8Z|1|A|C|2295
6O8Z|1|A|G|2296
6O8Z|1|A|C|2297
6O8Z|1|A|C|2298
*
6O8Z|1|A|G|2398
6O8Z|1|A|C|2399
6O8Z|1|A|U|2400
6O8Z|1|A|U|2401
6O8Z|1|A|A|2402
6O8Z|1|A|G|2403
6O8Z|1|A|U|2404
6O8Z|1|A|G|2405
6O8Z|1|A|A|2406
6O8Z|1|A|U|2407
6O8Z|1|A|C|2408
6O8Z|1|A|C|2409
*
6O8Z|1|A|G|2435
6O8Z|1|A|C|2436
6O8Z|1|A|U|2437
6O8Z|1|A|C|2438
6O8Z|1|A|A|2439
6O8Z|1|A|A|2440
6O8Z|1|A|C|2441
6O8Z|1|A|G|2442
6O8Z|1|A|G|2443
6O8Z|1|A|A|2444
6O8Z|1|A|U|2445
6O8Z|1|A|A|2446
6O8Z|1|A|A|2447
6O8Z|1|A|A|2448
6O8Z|1|A|A|2449
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 3
- 50S ribosomal protein L33
- Chain 5
- 50S ribosomal protein L35
- Chain C
- 50S ribosomal protein L2
- Chain M
- 50S ribosomal protein L15
- Chain X
- 50S ribosomal protein L27
- Chain Y
- 50S ribosomal protein L28
Coloring options: