J6_6O97_003

3D structure

PDB id

6O97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.75 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

6O97|1|2A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6O97|1|2A|G|44
6O97|1|2A|C|45
*
6O97|1|2A|G|179
6O97|1|2A|G|180
6O97|1|2A|A|181
6O97|1|2A|A|182
6O97|1|2A|C|183
*
6O97|1|2A|G|214
6O97|1|2A|G|215
6O97|1|2A|A|216
6O97|1|2A|G|217
6O97|1|2A|A|218
6O97|1|2A|G|219
6O97|1|2A|G|220
6O97|1|2A|A|221
6O97|1|2A|A|222
6O97|1|2A|A|223
6O97|1|2A|G|224
*
6O97|1|2A|C|231
6O97|1|2A|G|232
6O97|1|2A|A|233
6O97|1|2A|C|234
6O97|1|2A|U|235
*
6O97|1|2A|A|262
6O97|1|2A|C|263
6O97|1|2A|C|264
6O97|1|2A|A|265
6O97|1|2A|G|266
*
6O97|1|2A|C|426
6O97|1|2A|U|427
6O97|1|2A|A|428
6O97|1|2A|A|429
6O97|1|2A|G|430
6O97|1|2A|U|431
6O97|1|2A|A|432
6O97|1|2A|C|433

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 27

50S ribosomal protein L34