J6_6O9K_001

3D structure

PDB id

6O9K (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

6O9K|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6O9K|1|A|G|45
6O9K|1|A|G|46
*
6O9K|1|A|C|179
6O9K|1|A|G|180
6O9K|1|A|A|181
6O9K|1|A|A|182
6O9K|1|A|C|183
*
6O9K|1|A|G|214
6O9K|1|A|G|215
6O9K|1|A|A|216
6O9K|1|A|A|217
6O9K|1|A|A|218
6O9K|1|A|A|219
6O9K|1|A|G|220
6O9K|1|A|A|221
6O9K|1|A|A|222
6O9K|1|A|A|223
6O9K|1|A|U|224
*
6O9K|1|A|A|231
6O9K|1|A|G|232
6O9K|1|A|A|233
6O9K|1|A|U|234
6O9K|1|A|U|235
*
6O9K|1|A|A|262
6O9K|1|A|G|263
6O9K|1|A|C|264
6O9K|1|A|A|265
6O9K|1|A|G|266
*
6O9K|1|A|C|426
6O9K|1|A|U|427
6O9K|1|A|A|428
6O9K|1|A|A|429
6O9K|1|A|A|430
6O9K|1|A|U|431
6O9K|1|A|A|432
6O9K|1|A|C|433

Current chains

Chain A

23S rRNA

Nearby chains

Chain 7

50S ribosomal protein L34