J6_6OLG_001
3D structure
- PDB id
- 6OLG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GGCGAC*GGAAAAGAAAC*GGAUU*AAGAG*CUAAAUAC*GUC
- Length
- 38 nucleotides
- Bulged bases
- 6OLG|1|A2|A|66, 6OLG|1|A3|U|34
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OLG|1|A2|G|21
6OLG|1|A2|G|22
6OLG|1|A2|C|23
6OLG|1|A2|G|24
6OLG|1|A2|A|25
6OLG|1|A2|C|26
*
6OLG|1|A2|G|57
6OLG|1|A2|G|58
6OLG|1|A2|A|59
6OLG|1|A2|A|60
6OLG|1|A2|A|61
6OLG|1|A2|A|62
6OLG|1|A2|G|63
6OLG|1|A2|A|64
6OLG|1|A2|A|65
6OLG|1|A2|A|66
6OLG|1|A2|C|67
*
6OLG|1|A2|G|74
6OLG|1|A2|G|75
6OLG|1|A2|A|76
6OLG|1|A2|U|77
6OLG|1|A2|U|78
*
6OLG|1|A2|A|105
6OLG|1|A2|A|106
6OLG|1|A2|G|107
6OLG|1|A2|A|108
6OLG|1|A2|G|109
*
6OLG|1|A2|C|326
6OLG|1|A2|U|327
6OLG|1|A2|A|328
6OLG|1|A2|A|329
6OLG|1|A2|A|330
6OLG|1|A2|U|331
6OLG|1|A2|A|332
6OLG|1|A2|C|333
*
6OLG|1|A3|G|33
6OLG|1|A3|U|34
6OLG|1|A3|C|35
Current chains
- Chain A2
- 28S ribosomal RNA
- Chain A3
- 5.8S ribosomal RNA
Nearby chains
- Chain AL
- 60S ribosomal protein L13
- Chain AN
- 60S ribosomal protein L15
- Chain Ah
- 60S ribosomal protein L35
- Chain Ai
- 60S ribosomal protein L36
- Chain Aj
- 60S ribosomal protein L37
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