J6_6OLI_002
3D structure
- PDB id
- 6OLI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CGAG*CGCAA*UGAAG*CGAG*CGG*CACGAG
- Length
- 27 nucleotides
- Bulged bases
- 6OLI|1|t|C|1483, 6OLI|1|t|G|1484
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OLI|1|t|C|1335
6OLI|1|t|G|1336
6OLI|1|t|A|1337
6OLI|1|t|G|1338
*
6OLI|1|t|C|1367
6OLI|1|t|G|1368
6OLI|1|t|C|1369
6OLI|1|t|A|1370
6OLI|1|t|A|1371
*
6OLI|1|t|U|1378
6OLI|1|t|G|1379
6OLI|1|t|A|1380
6OLI|1|t|A|1381
6OLI|1|t|G|1382
*
6OLI|1|t|C|1401
6OLI|1|t|G|1402
6OLI|1|t|A|1403
6OLI|1|t|G|1404
*
6OLI|1|t|C|1446
6OLI|1|t|G|1447
6OLI|1|t|G|1448
*
6OLI|1|t|C|1481
6OLI|1|t|A|1482
6OLI|1|t|C|1483
6OLI|1|t|G|1484
6OLI|1|t|A|1485
6OLI|1|t|G|1486
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain C
- 60S ribosomal protein L4
- Chain M
- 60S ribosomal protein L13
- Chain R
- 60S ribosomal protein L18
- Chain b
- 60S ribosomal protein L27a
- Chain c
- 60S ribosomal protein L29
- Chain j
- 60S ribosomal protein L36
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