J6_6ORD_002
3D structure
- PDB id
- 6ORD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UUUA*UUUG*CG*CGCC*GCCUAGUGAACC*GAUCAACGGAUAAAA
- Length
- 41 nucleotides
- Bulged bases
- 6ORD|1|RA|U|2076, 6ORD|1|RA|U|2390, 6ORD|1|RA|G|2428, 6ORD|1|RA|A|2430, 6ORD|1|RA|U|2431, 6ORD|1|RA|A|2434
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ORD|1|RA|U|2074
6ORD|1|RA|U|2075
6ORD|1|RA|U|2076
6ORD|1|RA|A|2077
*
6ORD|1|RA|U|2243
6ORD|1|RA|U|2244
6ORD|1|RA|U|2245
6ORD|1|RA|G|2246
*
6ORD|1|RA|C|2258
6ORD|1|RA|G|2259
*
6ORD|1|RA|C|2281
6ORD|1|RA|G|2282
6ORD|1|RA|C|2283
6ORD|1|RA|C|2284
*
6ORD|1|RA|G|2384
6ORD|1|RA|C|2385
6ORD|1|RA|C|2386
6ORD|1|RA|U|2387
6ORD|1|RA|A|2388
6ORD|1|RA|G|2389
6ORD|1|RA|U|2390
6ORD|1|RA|G|2391
6ORD|1|RA|A|2392
6ORD|1|RA|A|2393
6ORD|1|RA|C|2394
6ORD|1|RA|C|2395
*
6ORD|1|RA|G|2421
6ORD|1|RA|A|2422
6ORD|1|RA|U|2423
6ORD|1|RA|C|2424
6ORD|1|RA|A|2425
6ORD|1|RA|A|2426
6ORD|1|RA|C|2427
6ORD|1|RA|G|2428
6ORD|1|RA|G|2429
6ORD|1|RA|A|2430
6ORD|1|RA|U|2431
6ORD|1|RA|A|2432
6ORD|1|RA|A|2433
6ORD|1|RA|A|2434
6ORD|1|RA|A|2435
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain R0
- 50S ribosomal protein L27
- Chain R1
- 50S ribosomal protein L28
- Chain R6
- 50S ribosomal protein L33
- Chain R8
- 50S ribosomal protein L35
- Chain RD
- 50S ribosomal protein L2
- Chain RP
- 50S ribosomal protein L15
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