3D structure

PDB id
6OSQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF1 accommodated state bound Release complex 70S at long incubation time point
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC
Length
36 nucleotides
Bulged bases
6OSQ|1|1|A|223
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OSQ|1|1|G|45
6OSQ|1|1|G|46
*
6OSQ|1|1|C|179
6OSQ|1|1|G|180
6OSQ|1|1|A|181
6OSQ|1|1|A|182
6OSQ|1|1|C|183
*
6OSQ|1|1|G|214
6OSQ|1|1|G|215
6OSQ|1|1|A|216
6OSQ|1|1|A|217
6OSQ|1|1|A|218
6OSQ|1|1|A|219
6OSQ|1|1|G|220
6OSQ|1|1|A|221
6OSQ|1|1|A|222
6OSQ|1|1|A|223
6OSQ|1|1|U|224
*
6OSQ|1|1|A|231
6OSQ|1|1|G|232
6OSQ|1|1|A|233
6OSQ|1|1|U|234
6OSQ|1|1|U|235
*
6OSQ|1|1|A|262
6OSQ|1|1|G|263
6OSQ|1|1|C|264
6OSQ|1|1|A|265
6OSQ|1|1|G|266
*
6OSQ|1|1|C|426
6OSQ|1|1|U|427
6OSQ|1|1|A|428
6OSQ|1|1|A|429
6OSQ|1|1|A|430
6OSQ|1|1|U|431
6OSQ|1|1|A|432
6OSQ|1|1|C|433

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain d
50S ribosomal protein L34

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1727 s