J6_6PC7_001

3D structure

PDB id

6PC7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound 46

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

6PC7|1|I|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6PC7|1|I|G|45
6PC7|1|I|G|46
*
6PC7|1|I|C|179
6PC7|1|I|G|180
6PC7|1|I|A|181
6PC7|1|I|A|182
6PC7|1|I|C|183
*
6PC7|1|I|G|214
6PC7|1|I|G|215
6PC7|1|I|A|216
6PC7|1|I|A|217
6PC7|1|I|A|218
6PC7|1|I|A|219
6PC7|1|I|G|220
6PC7|1|I|A|221
6PC7|1|I|A|222
6PC7|1|I|A|223
6PC7|1|I|U|224
*
6PC7|1|I|A|231
6PC7|1|I|G|232
6PC7|1|I|A|233
6PC7|1|I|U|234
6PC7|1|I|U|235
*
6PC7|1|I|A|262
6PC7|1|I|G|263
6PC7|1|I|C|264
6PC7|1|I|A|265
6PC7|1|I|G|266
*
6PC7|1|I|C|426
6PC7|1|I|U|427
6PC7|1|I|A|428
6PC7|1|I|A|429
6PC7|1|I|A|430
6PC7|1|I|U|431
6PC7|1|I|A|432
6PC7|1|I|C|433

Current chains

Chain I

23S ribosomal RNA

Nearby chains