J6_6PCH_001

3D structure

PDB id

6PCH (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound 21

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GG*CGAACC*GAGGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

39 nucleotides

Bulged bases

6PCH|1|I|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6PCH|1|I|G|45
6PCH|1|I|G|46
*
6PCH|1|I|C|179
6PCH|1|I|G|180
6PCH|1|I|A|181
6PCH|1|I|A|182
6PCH|1|I|C|183
6PCH|1|I|C|184
*
6PCH|1|I|G|212
6PCH|1|I|A|213
6PCH|1|I|G|214
6PCH|1|I|G|215
6PCH|1|I|A|216
6PCH|1|I|A|217
6PCH|1|I|A|218
6PCH|1|I|A|219
6PCH|1|I|G|220
6PCH|1|I|A|221
6PCH|1|I|A|222
6PCH|1|I|A|223
6PCH|1|I|U|224
*
6PCH|1|I|A|231
6PCH|1|I|G|232
6PCH|1|I|A|233
6PCH|1|I|U|234
6PCH|1|I|U|235
*
6PCH|1|I|A|262
6PCH|1|I|G|263
6PCH|1|I|C|264
6PCH|1|I|A|265
6PCH|1|I|G|266
*
6PCH|1|I|C|426
6PCH|1|I|U|427
6PCH|1|I|A|428
6PCH|1|I|A|429
6PCH|1|I|A|430
6PCH|1|I|U|431
6PCH|1|I|A|432
6PCH|1|I|C|433

Current chains

Chain I

23S ribosomal RNA

Nearby chains