J6_6PCR_001

3D structure

PDB id

6PCR (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound 40o

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

6PCR|1|I|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6PCR|1|I|G|45
6PCR|1|I|G|46
*
6PCR|1|I|C|179
6PCR|1|I|G|180
6PCR|1|I|A|181
6PCR|1|I|A|182
6PCR|1|I|C|183
*
6PCR|1|I|G|214
6PCR|1|I|G|215
6PCR|1|I|A|216
6PCR|1|I|A|217
6PCR|1|I|A|218
6PCR|1|I|A|219
6PCR|1|I|G|220
6PCR|1|I|A|221
6PCR|1|I|A|222
6PCR|1|I|A|223
6PCR|1|I|U|224
*
6PCR|1|I|A|231
6PCR|1|I|G|232
6PCR|1|I|A|233
6PCR|1|I|U|234
6PCR|1|I|U|235
*
6PCR|1|I|A|262
6PCR|1|I|G|263
6PCR|1|I|C|264
6PCR|1|I|A|265
6PCR|1|I|G|266
*
6PCR|1|I|C|426
6PCR|1|I|U|427
6PCR|1|I|A|428
6PCR|1|I|A|429
6PCR|1|I|A|430
6PCR|1|I|U|431
6PCR|1|I|A|432
6PCR|1|I|C|433

Current chains

Chain I

23S ribosomal RNA

Nearby chains