J6_6PCS_001

3D structure

PDB id

6PCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound 40e

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

6PCS|1|I|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6PCS|1|I|G|45
6PCS|1|I|G|46
*
6PCS|1|I|C|179
6PCS|1|I|G|180
6PCS|1|I|A|181
6PCS|1|I|A|182
6PCS|1|I|C|183
*
6PCS|1|I|G|214
6PCS|1|I|G|215
6PCS|1|I|A|216
6PCS|1|I|A|217
6PCS|1|I|A|218
6PCS|1|I|A|219
6PCS|1|I|G|220
6PCS|1|I|A|221
6PCS|1|I|A|222
6PCS|1|I|A|223
6PCS|1|I|U|224
*
6PCS|1|I|A|231
6PCS|1|I|G|232
6PCS|1|I|A|233
6PCS|1|I|U|234
6PCS|1|I|U|235
*
6PCS|1|I|A|262
6PCS|1|I|G|263
6PCS|1|I|C|264
6PCS|1|I|A|265
6PCS|1|I|G|266
*
6PCS|1|I|C|426
6PCS|1|I|U|427
6PCS|1|I|A|428
6PCS|1|I|A|429
6PCS|1|I|A|430
6PCS|1|I|U|431
6PCS|1|I|A|432
6PCS|1|I|C|433

Current chains

Chain I

23S ribosomal RNA

Nearby chains