J6_6PCT_001

3D structure

PDB id

6PCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound 41q

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

6PCT|1|I|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6PCT|1|I|G|45
6PCT|1|I|G|46
*
6PCT|1|I|C|179
6PCT|1|I|G|180
6PCT|1|I|A|181
6PCT|1|I|A|182
6PCT|1|I|C|183
*
6PCT|1|I|G|214
6PCT|1|I|G|215
6PCT|1|I|A|216
6PCT|1|I|A|217
6PCT|1|I|A|218
6PCT|1|I|A|219
6PCT|1|I|G|220
6PCT|1|I|A|221
6PCT|1|I|A|222
6PCT|1|I|A|223
6PCT|1|I|U|224
*
6PCT|1|I|A|231
6PCT|1|I|G|232
6PCT|1|I|A|233
6PCT|1|I|U|234
6PCT|1|I|U|235
*
6PCT|1|I|A|262
6PCT|1|I|G|263
6PCT|1|I|C|264
6PCT|1|I|A|265
6PCT|1|I|G|266
*
6PCT|1|I|C|426
6PCT|1|I|U|427
6PCT|1|I|A|428
6PCT|1|I|A|429
6PCT|1|I|A|430
6PCT|1|I|U|431
6PCT|1|I|A|432
6PCT|1|I|C|433

Current chains

Chain I

23S ribosomal RNA

Nearby chains