J6_6QIS_001
3D structure
- PDB id
- 6QIS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of CAG repeats with synthetic CMBL3a compound (model II)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 1.99 Å
Loop
- Sequence
- CAG*CAG*CAGCAG*CAG*CAG*CAGCAG
- Length
- 24 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6QIS|1|A|C|2
6QIS|1|A|A|3
6QIS|1|A|G|4
*
6QIS|1|D|C|5
6QIS|1|D|A|6
6QIS|1|D|G|7
*
6QIS|1|C|C|2
6QIS|1|C|A|3
6QIS|1|C|G|4
6QIS|1|C|C|5
6QIS|1|C|A|6
6QIS|1|C|G|7
*
6QIS|1|D|C|2
6QIS|1|D|A|3
6QIS|1|D|G|4
*
6QIS|1|A|C|5
6QIS|1|A|A|6
6QIS|1|A|G|7
*
6QIS|1|B|C|2
6QIS|1|B|A|3
6QIS|1|B|G|4
6QIS|1|B|C|5
6QIS|1|B|A|6
6QIS|1|B|G|7
Current chains
- Chain A
- RNA (5'-R(*GP*CP*AP*GP*CP*AP*GP*C)-3')
- Chain B
- RNA (5'-R(*GP*CP*AP*GP*CP*AP*GP*C)-3')
- Chain C
- RNA (5'-R(*GP*CP*AP*GP*CP*AP*GP*C)-3')
- Chain D
- RNA (5'-R(*GP*CP*AP*GP*CP*AP*GP*C)-3')
Nearby chains
- Chain E
- RNA (5'-R(*GP*CP*AP*GP*CP*AP*GP*C)-3')
- Chain F
- RNA (5'-R(*GP*CP*AP*GP*CP*AP*GP*C)-3')
- Chain G
- RNA (5'-R(*GP*CP*AP*GP*CP*AP*GP*C)-3')
- Chain H
- RNA (5'-R(*GP*CP*AP*GP*CP*AP*GP*C)-3')
Coloring options: