J6_6R6G_002
3D structure
- PDB id
- 6R6G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex with SRP.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CGAG*CGCAA*UGAAG*CGAG*CGG*CACGAG
- Length
- 27 nucleotides
- Bulged bases
- 6R6G|1|5|C|1061
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6R6G|1|5|C|913
6R6G|1|5|G|914
6R6G|1|5|A|915
6R6G|1|5|G|916
*
6R6G|1|5|C|942
6R6G|1|5|G|943
6R6G|1|5|C|944
6R6G|1|5|A|945
6R6G|1|5|A|946
*
6R6G|1|5|U|953
6R6G|1|5|G|954
6R6G|1|5|A|955
6R6G|1|5|A|956
6R6G|1|5|G|957
*
6R6G|1|5|C|979
6R6G|1|5|G|980
6R6G|1|5|A|981
6R6G|1|5|G|982
*
6R6G|1|5|C|1024
6R6G|1|5|G|1025
6R6G|1|5|G|1026
*
6R6G|1|5|C|1059
6R6G|1|5|A|1060
6R6G|1|5|C|1061
6R6G|1|5|G|1062
6R6G|1|5|A|1063
6R6G|1|5|G|1064
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain C
- uL4
- Chain L
- 60S ribosomal protein L13
- Chain Q
- eL18
- Chain a
- uL15
- Chain b
- eL29
- Chain i
- 60S ribosomal protein L36
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