J6_6S0Z_002

3D structure

PDB id

6S0Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 50S ribosome (delta R88 A89 uL22) in complex with erythromycin.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

GCC*GGCACACC*GAGGAAGAGAAAG*CGAUU*AAGAG*CUAAAUAC

Length

42 nucleotides

Bulged bases

6S0Z|1|A|A|226

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S0Z|1|A|G|45
6S0Z|1|A|C|46
6S0Z|1|A|C|47
*
6S0Z|1|A|G|180
6S0Z|1|A|G|181
6S0Z|1|A|C|182
6S0Z|1|A|A|183
6S0Z|1|A|C|184
6S0Z|1|A|A|185
6S0Z|1|A|C|186
6S0Z|1|A|C|187
*
6S0Z|1|A|G|215
6S0Z|1|A|A|216
6S0Z|1|A|G|217
6S0Z|1|A|G|218
6S0Z|1|A|A|219
6S0Z|1|A|A|220
6S0Z|1|A|G|221
6S0Z|1|A|A|222
6S0Z|1|A|G|223
6S0Z|1|A|A|224
6S0Z|1|A|A|225
6S0Z|1|A|A|226
6S0Z|1|A|G|227
*
6S0Z|1|A|C|234
6S0Z|1|A|G|235
6S0Z|1|A|A|236
6S0Z|1|A|U|237
6S0Z|1|A|U|238
*
6S0Z|1|A|A|265
6S0Z|1|A|A|266
6S0Z|1|A|G|267
6S0Z|1|A|A|268
6S0Z|1|A|G|269
*
6S0Z|1|A|C|472
6S0Z|1|A|U|473
6S0Z|1|A|A|474
6S0Z|1|A|A|475
6S0Z|1|A|A|476
6S0Z|1|A|U|477
6S0Z|1|A|A|478
6S0Z|1|A|C|479

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34