J6_6SWA_002
3D structure
- PDB id
- 6SWA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mus musculus 80S ribosome bound to the peptide tunnel exit chaperone EBP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAG*CGCAA*UGAAGG*CCGAG*CGG*CACGAG
- Length
- 29 nucleotides
- Bulged bases
- 6SWA|1|q|C|1483
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6SWA|1|q|C|1335
6SWA|1|q|G|1336
6SWA|1|q|A|1337
6SWA|1|q|G|1338
*
6SWA|1|q|C|1367
6SWA|1|q|G|1368
6SWA|1|q|C|1369
6SWA|1|q|A|1370
6SWA|1|q|A|1371
*
6SWA|1|q|U|1378
6SWA|1|q|G|1379
6SWA|1|q|A|1380
6SWA|1|q|A|1381
6SWA|1|q|G|1382
6SWA|1|q|G|1383
*
6SWA|1|q|C|1400
6SWA|1|q|C|1401
6SWA|1|q|G|1402
6SWA|1|q|A|1403
6SWA|1|q|G|1404
*
6SWA|1|q|C|1446
6SWA|1|q|G|1447
6SWA|1|q|G|1448
*
6SWA|1|q|C|1481
6SWA|1|q|A|1482
6SWA|1|q|C|1483
6SWA|1|q|G|1484
6SWA|1|q|A|1485
6SWA|1|q|G|1486
Current chains
- Chain q
- 28S ribosomal RNA (3612-MER)
Nearby chains
- Chain C
- 60S ribosomal protein L4
- Chain K
- 60S ribosomal protein L13
- Chain P
- 60S ribosomal protein L18
- Chain Y
- 60S ribosomal protein L27a
- Chain Z
- 60S ribosomal protein L29
- Chain g
- 60S ribosomal protein L36
Coloring options: