J6_6T83_001
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- GAGUAC*GGAAAAGAAAC*GGAUU*AAAAG*CUAAAUAUUGG*CAUC
- Length
- 42 nucleotides
- Bulged bases
- 6T83|1|1b|A|67, 6T83|1|1b|U|329, 6T83|1|3b|U|34
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6T83|1|1b|G|22
6T83|1|1b|A|23
6T83|1|1b|G|24
6T83|1|1b|U|25
6T83|1|1b|A|26
6T83|1|1b|C|27
*
6T83|1|1b|G|58
6T83|1|1b|G|59
6T83|1|1b|A|60
6T83|1|1b|A|61
6T83|1|1b|A|62
6T83|1|1b|A|63
6T83|1|1b|G|64
6T83|1|1b|A|65
6T83|1|1b|A|66
6T83|1|1b|A|67
6T83|1|1b|C|68
*
6T83|1|1b|G|75
6T83|1|1b|G|76
6T83|1|1b|A|77
6T83|1|1b|U|78
6T83|1|1b|U|79
*
6T83|1|1b|A|106
6T83|1|1b|A|107
6T83|1|1b|A|108
6T83|1|1b|A|109
6T83|1|1b|G|110
*
6T83|1|1b|C|321
6T83|1|1b|U|322
6T83|1|1b|A|323
6T83|1|1b|A|324
6T83|1|1b|A|325
6T83|1|1b|U|326
6T83|1|1b|A|327
6T83|1|1b|U|328
6T83|1|1b|U|329
6T83|1|1b|G|330
6T83|1|1b|G|331
*
6T83|1|3b|C|32
6T83|1|3b|A|33
6T83|1|3b|U|34
6T83|1|3b|C|35
Current chains
- Chain 1b
- 25S rRNA
- Chain 3b
- 5.8S rRNA
Nearby chains
- Chain Cy
- 60S ribosomal protein L4-A
- Chain Ly
- 60S ribosomal protein L13-A
- Chain Ny
- 60S ribosomal protein L15-A
- Chain hb
- 60S ribosomal protein L35-A
- Chain ib
- 60S ribosomal protein L36-A
- Chain jb
- 60S ribosomal protein L37-A
Coloring options: