J6_6T83_003
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- GAGUAC*GGAAAAGAAAC*GGAUUG*CAAAAG*CUAAAUAUUGG*CAUC
- Length
- 44 nucleotides
- Bulged bases
- 6T83|1|Aa|A|67, 6T83|1|Aa|U|329, 6T83|1|Ca|U|34
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6T83|1|Aa|G|22
6T83|1|Aa|A|23
6T83|1|Aa|G|24
6T83|1|Aa|U|25
6T83|1|Aa|A|26
6T83|1|Aa|C|27
*
6T83|1|Aa|G|58
6T83|1|Aa|G|59
6T83|1|Aa|A|60
6T83|1|Aa|A|61
6T83|1|Aa|A|62
6T83|1|Aa|A|63
6T83|1|Aa|G|64
6T83|1|Aa|A|65
6T83|1|Aa|A|66
6T83|1|Aa|A|67
6T83|1|Aa|C|68
*
6T83|1|Aa|G|75
6T83|1|Aa|G|76
6T83|1|Aa|A|77
6T83|1|Aa|U|78
6T83|1|Aa|U|79
6T83|1|Aa|G|80
*
6T83|1|Aa|C|105
6T83|1|Aa|A|106
6T83|1|Aa|A|107
6T83|1|Aa|A|108
6T83|1|Aa|A|109
6T83|1|Aa|G|110
*
6T83|1|Aa|C|321
6T83|1|Aa|U|322
6T83|1|Aa|A|323
6T83|1|Aa|A|324
6T83|1|Aa|A|325
6T83|1|Aa|U|326
6T83|1|Aa|A|327
6T83|1|Aa|U|328
6T83|1|Aa|U|329
6T83|1|Aa|G|330
6T83|1|Aa|G|331
*
6T83|1|Ca|C|32
6T83|1|Ca|A|33
6T83|1|Ca|U|34
6T83|1|Ca|C|35
Current chains
- Chain Aa
- 25S rRNA
- Chain Ca
- 5.8S rRNA
Nearby chains
- Chain Fa
- 60S ribosomal protein L4-A
- Chain Na
- 60S ribosomal protein L13-A
- Chain Pa
- 60S ribosomal protein L15-A
- Chain S
- 60S ribosomal protein L35-A
- Chain T
- 60S ribosomal protein L36-A
- Chain U
- 60S ribosomal protein L37-A
Coloring options: